Browse of TCMCG065C33008 protein

CDS

Accession Number	TCMCG065C33008
gbkey	CDS
Protein Id	XP_004983839.1
Location	complement(join(40499204..40499272,40499493..40499567,40499847..40500521,40501235..40501722,40502097..40502190,40502290..40504596,40504858..40504999,40505112..40506622))
Gene	LOC101756078
GeneID	101756078
Organism	Setaria italica

Protein

Length	1786aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA207554
db_source	XM_004983782.4
Definition	lysine-specific histone demethylase 1 homolog 3 [Setaria italica]

EGGNOG-MAPPER Annotation

COG_category	Q
Description	SWIRM domain
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K11450        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04714        [VIEW IN KEGG] map04714        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0006325        [VIEW IN EMBL-EBI] GO:0006464        [VIEW IN EMBL-EBI] GO:0006476        [VIEW IN EMBL-EBI] GO:0006479        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008213        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0016569        [VIEW IN EMBL-EBI] GO:0016570        [VIEW IN EMBL-EBI] GO:0016571        [VIEW IN EMBL-EBI] GO:0016575        [VIEW IN EMBL-EBI] GO:0018022        [VIEW IN EMBL-EBI] GO:0018193        [VIEW IN EMBL-EBI] GO:0018205        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0022622        [VIEW IN EMBL-EBI] GO:0032259        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0034968        [VIEW IN EMBL-EBI] GO:0035601        [VIEW IN EMBL-EBI] GO:0036211        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0043414        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044267        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0048364        [VIEW IN EMBL-EBI] GO:0048731        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0051276        [VIEW IN EMBL-EBI] GO:0051568        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0098732        [VIEW IN EMBL-EBI] GO:0099402        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGATGATACCTTGGCTATCATAAGGAAGAAGTTGAAGAAGCGGAAGAAGGGCAAGGATGGTACTGATTTCGGTGAAGTGGCTGAATGTGGAGCTGATGCTCAAGTATTGGTTCAACAGGAAGATGTGCAGGGTGCTGTTCATACAGGTGATGGTGTTGCTGATGAGAAGAGCAATCTGAATGTCGTAAAATTGGGGGATGTTGAAGTTGCTGGGGATGGTGCTCAGCATGTGGACGATCTGGGGTTGGAAGACTCCTTGTCGGTGCTGTTTACGAGATCTGGTCGGAAGTCTCGGCAGGTCTCAGAGAAGGAGGCTGAAGGTGCCGAAGTTGCTTGTCCACATGAAGAGGAAGGTCTTGACAAGGGATCTGTTTTGGATCCCGATACAGCTTCCAAGGTCACTAAAAGGAGAAGGCGACGTACAAAGGAAGAGATGAAGAATGCTGCTGTGCAGGATCGGAAAGCCTCCTTGCCCCGTAAAGCAAAGGCAAAGGCAAATGGTGGCACGTCTACTGGACACTACAAGGTTGGTCCTCAGCAAACCTTGGGAGGATCGTCTTCTGTTTCTCCTAAACTGGAAAATAAGTCTGTTGGGAAAGAGAAGGCTGCAGATGATGGATTATGCCATCGATCATTAGGAGAATCGCTTCTACAAGAAGATGTGGAAGCCCACAAAGTACTGAAGGATGGATCTAGGAACCCTTCCAATGGGTCCACTCATCACTTTGAAATCTCAGCTCGGGCAAGCAATCACCCTGTGCTGAAACCTTGTTCAGGGAAGCTTGCTGAAAAAACATCTTGCACTGCAGCAAACATGATCAATGTTGGTGTTTCTGATGCACACGCATGTTCCCAAACACTAGGGAAGGACAGCAGTGATGATGTAAATTTTTCTCAAGGCAAATCACCAACATCAACCATAAGAAGGAAAACTGGTCTAAAACCAAAACAGGTGCCCCGGAAACCTGTTCGACAAAAAGAGGCATTATCATCTCTTGATGCTGATAGTAAACCAGCTGAAACAACAGAAAGTATTGAACCAAATGCAGCTGTGCTTACAGAGGGAAATTTCGATCAGCTGGCTGTTTTGGGGGCCAAGGATTCCTGTTCTTCGCATGACATGGCAGCACCTTCAAATGATGTGGATATGGCTGATGTGGCAGTGCCATTGGATTATGAAGACACGGAGAACGCATCAAAGGTGAAACGTGTTACACGAAGTTCCAAAAAACGCAAACATGGTGACATGGCATATGAGGGTGATGTTGACTGGGAAACTCTAATGCAAGAACAGGGGCTGTTCTCAAACCCCTTAGCAGGTTTTGCGGACCAATCAATAAAATCAAAAGATAAAATTAAAACTTCTGAAGTTTATGAGGGTGGAGGTGATAATGGTCTTGCTGCAGTACGTGCTGGCCTAAAGGCAAAGGCTGTTACACCACTTGAGAAGATAAAGTTCAAGGAAGTCTTGAAGCACAAGGGTGGCCTTCAGGAGTACCTAGAGTGCAGGAATATGATACTAAGCTGCTGGAGCAAGGATGTTAAACATTTATTGAATCTTGCAGAATGTGGTGTTTCCGTTGTTCCTTTGAAAGATGAGTTGCCACGTCACACGCTTATTCGTGATGTGTATTTATTCTTAGACCAAAATGGCTACATAAATGCTGGAATTGCATCAGATAAGGTGGCAAAGGAGCACGACACTCCAGAAGTTGTGGATGTACCCAAGCTAAATGAATCAAATCAAATGGAATCAGTCAGCATTCAAGATGGCATTGTCTCTGTACCACTCCAGAATGGGGATTTTGAGTATGGCACAGGCATTGAATGCTGCAGAACTGTATGTGTAAAAAATACTGTAGAAGCATCAAATGACAAGAATTGCCCCACTGTTGACTGTGATGCTCTGGAGTTGCTACCTTACTTGAAGTCTGAAGAACAGCCCACTGAAGAAAAGAATCTAGGCGTGTCAACTGAAGGTAGAGATGCATCACTGCCGTCCAACAATTTGGATATCCAAGGCAGGTCATATCTGGACAGTTCTGTTGGAAAAGTTGAAGTCTCTCACCAACCAGAAGCCCCAGAAATTGAAACTTGTGGAAACAACTGTCAAAGTGATAGGGCTGAATCTGGTGTGTGTCGCAAAAGGGTAATCATTGTGGGAGCTGGCCCTGCTGGTTTAACTGCTGCTCGCCATTTGCAACGACAAGGTTTTTCTATCACTGTTCTTGAGGCACGAGATAGGATTGGTGGTCGTGTTTATACAGATCGCACGTCACTTTCAGTTCCTGTAGATTTGGGTGCTAGCATTATTACAGGGGTGGAGGCTGATATAGCTACTGAAAGACGGGCTGATCCATCCTCTTTGATTTGTTCTCAGCTTGGTCTTGAACTTACTGTGTTGAATAGTGCTTGCCCTCTGTATGATGTAGTAACTGGCAACAAGGTTCCTGATGCTCTGGATGATGATTTAGAAGCTGAATACAATGGCCTTCTTGATGAGATGGCACTGCTTTTTGCACAAAATGGTGACAGTGCAATTGGTTTATCCCTTGAGGATGGACTGGAGTACGCTCTTAGGAAGCACCGTGCAGCTCAACATATGGATATTGTTGAGCGGGATGATCACTTAAAAAGTTTGACAAATGCTGGAGCTATGGACATTTCCAAAAGTGCTTCAACAGAAAAGGAGATAGCTCATTGTGGGAAGGATGATAAGGTAGACGTCCTCAGTCCTCTTGAGAGAAGGGTTATGAACTGGCACTTTGCACATTTAGAGTATGGTTGTGCTGCAACCCTAAAATCCGTGTCCCTTCCATACTGGAACCAGGATGATGTATATGGAGGATTCGGTGGTCCTCATTGCATGATCAAAGGGGGCTATGACACTGTTCTATGCAGCCTTGCAAAAGGACTTGATCTTAGGTTAAATCATATTGTGACTGAAGTACTGTATGGACATGGTGAGTCAGGGGCTAGCTGTAAGGATGGCAAGCACGTCAAGGTTTCCACTTCAAATGGAAATGAATTTATTGGAGATGCTGTGTTAATCACTGTTCCTCTTGGTTGCTTGAAAGCACAGACAATTAAATTTTCACCCTCCTTGCCAGATTGGAAACTATCTTCTATAAACAGGCTTGGGTTTGGTGTTCTAAACAAAATAGTATTGGAGTTCCCTGAGGTATTTTGGGATGATAATGTGGATTACTTTGGTGCAACTGCAGAAGAAACAGATTTAAGAGGACGATGCTTTATGTTTTGGAATCTCAGAAAAACAGTTGGGGCACCAGTTCTGATAGCTCTACTTGTTGGGAAGGCTGCTATAGATGGACAAAGCATCAGTTCTGATGTTCATGTTAACAGTGCTATGGTGGTTCTCCGAAAGCTCTTTAGGGATTCTTCTGTACCTGATCCGGTTGCATCTGTTGTGACAAATTGGGGCCTTGATCCATTTAGTAGAGGTGCTTACTCCTACGTTGCAGTTGGAGCATCAGGAAGAGATTATGATATTCTTGGAAGGCCAGTTGCAAATTGTTTATTTTTTGCTGGTGAAGCAACATGCAAAGAGCATCCAGATACTGTTGGTGGTGCAATTTTGAGTGGTTTGCGAGAAGCTGTTCGCATCATTGACTTAGTAAACACTGGAAATGACTATATCGCTGAGGTAGAAGCTCTACAAACTTACCAAATGCAGTCAGACAGTGAAAGGAGTGAAGTTAGAGACATGTCAAATAGACTTGAAGCATGTGCACTTTCTACCGCTCTAAGTAAAAACACGTCTGATGTGACGTATCCAATTGTTAGCAAGGAATCTTTGCTGCAAGAAATGTTCTTCAGTGCAAAAACAACATCAGGGCGCCTACATTTGGCTAAGGAGTTATTGAAGCTTCCTACAGATGTTCTTAAATCGTTTGCTGGATCTAAAGAAGGACTAAGCACACTGAACACTTGGATTCTTGATTCACTTGGGAAAAATGCTACTCAACTACTGCGGCACTGTGTGCGCTTGCTTGTGCTTGTTTCCACTGATCTGGTAGCTGTGCGTTTGTCAGGAATTGGGAGGACTGTAAAGGAAAAGGTTTGTGTGCACACAAGCCGAGATATTCGTGCTATAGCTCGTCAGCTGGTCAGTGTTTGGATCGAAGTTTTTCGTAAAGAAAAGGCCAGCAATGGACTCAAATTGCTGCGTCGAATGCCATCAATTGAATTAAGTAAGACAAAGAGTAAGGATTTGCAATCAGGAAAGCCTACCTTACGTGTGCCAAATGAAACTTTGGACAATAATAAAGTAGCTTCCCAGCGCCAGCGTGCAAGATTCGCAAGTAGCCACTCACCACCGAAAACAAGCAAGAAGTTTGAGAACAAGGAAACAAAATTGGAAATCGGGATGGCTACAAGGTCCGATGGCAACTCGTTTTCCCCAAAACAACAACATGGTATTGAATCTAAGGTGGAGCATGGCATTCCTATGTCCGAGGAAGAAGCTGCTGCATTTGCTGCTGCTGAGGCAGCTCGAGCTGCTGCCATAGCAGCTGCACAGGCATATGCATCTGTAGAGGCAGAGATAAGTGTGCCTCGTGAGCTTCCAAAGATACCATCATTCCATACTTTTGCGATGCGTGATCACCATTTGGATGAATCTGATACAAGAAAAAAGGGAGTGAAGGATAATTTTGGGAGACTTGAGTGCATACTGGAAAATGGTTCCAAGAATGGCAAAGCTAAGAACTCCTCACCTGACGATGCCAACTGCGCTGATGTTGACAGCTTGAAAATGTCTGGTGATAATGGCACTCAGAGGAGCCACTCGAACGAGAAAGCTTGCCTAGCAAATACTAGGGATCATTCTACAGACATTGGTGTTTTATTAGACGGTCGGGCATGGGTGGATACTGATACAATATGCATTGATGGTGTGAAGGATCCTCTAGCCATTGAGAGGTGGCAGGCACAGGCAATGGAAGCTGATAAAGAATTCTACAGTCGGATACGCATACCGGATGATGAAGATGCAACTAGTCAGAAGCAAGCGTGCCGTAGTTCTGCCTCACAGGGTGCCGACAGCAAACCTGCATCCGAACGGCAATCAAGAGGCGTGGAGCACATAAAACAGGGTCTCGTGAATTTCATAGCCTCGCTGCTGATGCCATTGTACAGAGGAAAAAAGATAGATCGTGATGGGTACAAAACAATCATGCGGAAAGCTGTTAACAAGATAATTGAGACATGCTCAGAAGGAGAGAAATTGATGACCACTCATGAGTTTCTTGATGTTAAAAGGAAAAATAAGATTGAATCCTTTGTGGACAAGATGGTTGACAGGCATTTGCATGTGGTAAGCAAACCTGCCAAACCATAA

Protein:   MDDTLAIIRKKLKKRKKGKDGTDFGEVAECGADAQVLVQQEDVQGAVHTGDGVADEKSNLNVVKLGDVEVAGDGAQHVDDLGLEDSLSVLFTRSGRKSRQVSEKEAEGAEVACPHEEEGLDKGSVLDPDTASKVTKRRRRRTKEEMKNAAVQDRKASLPRKAKAKANGGTSTGHYKVGPQQTLGGSSSVSPKLENKSVGKEKAADDGLCHRSLGESLLQEDVEAHKVLKDGSRNPSNGSTHHFEISARASNHPVLKPCSGKLAEKTSCTAANMINVGVSDAHACSQTLGKDSSDDVNFSQGKSPTSTIRRKTGLKPKQVPRKPVRQKEALSSLDADSKPAETTESIEPNAAVLTEGNFDQLAVLGAKDSCSSHDMAAPSNDVDMADVAVPLDYEDTENASKVKRVTRSSKKRKHGDMAYEGDVDWETLMQEQGLFSNPLAGFADQSIKSKDKIKTSEVYEGGGDNGLAAVRAGLKAKAVTPLEKIKFKEVLKHKGGLQEYLECRNMILSCWSKDVKHLLNLAECGVSVVPLKDELPRHTLIRDVYLFLDQNGYINAGIASDKVAKEHDTPEVVDVPKLNESNQMESVSIQDGIVSVPLQNGDFEYGTGIECCRTVCVKNTVEASNDKNCPTVDCDALELLPYLKSEEQPTEEKNLGVSTEGRDASLPSNNLDIQGRSYLDSSVGKVEVSHQPEAPEIETCGNNCQSDRAESGVCRKRVIIVGAGPAGLTAARHLQRQGFSITVLEARDRIGGRVYTDRTSLSVPVDLGASIITGVEADIATERRADPSSLICSQLGLELTVLNSACPLYDVVTGNKVPDALDDDLEAEYNGLLDEMALLFAQNGDSAIGLSLEDGLEYALRKHRAAQHMDIVERDDHLKSLTNAGAMDISKSASTEKEIAHCGKDDKVDVLSPLERRVMNWHFAHLEYGCAATLKSVSLPYWNQDDVYGGFGGPHCMIKGGYDTVLCSLAKGLDLRLNHIVTEVLYGHGESGASCKDGKHVKVSTSNGNEFIGDAVLITVPLGCLKAQTIKFSPSLPDWKLSSINRLGFGVLNKIVLEFPEVFWDDNVDYFGATAEETDLRGRCFMFWNLRKTVGAPVLIALLVGKAAIDGQSISSDVHVNSAMVVLRKLFRDSSVPDPVASVVTNWGLDPFSRGAYSYVAVGASGRDYDILGRPVANCLFFAGEATCKEHPDTVGGAILSGLREAVRIIDLVNTGNDYIAEVEALQTYQMQSDSERSEVRDMSNRLEACALSTALSKNTSDVTYPIVSKESLLQEMFFSAKTTSGRLHLAKELLKLPTDVLKSFAGSKEGLSTLNTWILDSLGKNATQLLRHCVRLLVLVSTDLVAVRLSGIGRTVKEKVCVHTSRDIRAIARQLVSVWIEVFRKEKASNGLKLLRRMPSIELSKTKSKDLQSGKPTLRVPNETLDNNKVASQRQRARFASSHSPPKTSKKFENKETKLEIGMATRSDGNSFSPKQQHGIESKVEHGIPMSEEEAAAFAAAEAARAAAIAAAQAYASVEAEISVPRELPKIPSFHTFAMRDHHLDESDTRKKGVKDNFGRLECILENGSKNGKAKNSSPDDANCADVDSLKMSGDNGTQRSHSNEKACLANTRDHSTDIGVLLDGRAWVDTDTICIDGVKDPLAIERWQAQAMEADKEFYSRIRIPDDEDATSQKQACRSSASQGADSKPASERQSRGVEHIKQGLVNFIASLLMPLYRGKKIDRDGYKTIMRKAVNKIIETCSEGEKLMTTHEFLDVKRKNKIESFVDKMVDRHLHVVSKPAKP